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atb-cli

index

AllTheBacteria/atb-cli

index

atb index¶

Build or rebuild the SQLite query index

atb index [flags]

Examples¶

  # Build the index (runs automatically after fetch)
  atb index

  # Rebuild the index
  atb index --force

Options¶

      --force   rebuild even if index already exists
  -h, --help    help for index

Options inherited from parent commands¶

      --config string     config file (default $HOME/.atb/config.toml)
      --data-dir string   directory for the local metadata index (default ~/.local/share/atb/data; override with $ATB_DATA_DIR)

SEE ALSO¶

atb - Query and download AllTheBacteria genomes