Atb osf

atb osf

Browse and download files from the AllTheBacteria OSF repository

Synopsis

Browse the AllTheBacteria file index on OSF (Open Science Framework).

The index catalogs ~3,000 files across 75+ project categories including assemblies, annotations, AMR results, MLST, protein structures, and more.

The index is cached locally and refreshed every 7 days.

Options

  -h, --help   help for osf

Options inherited from parent commands

      --config string     config file (default $HOME/.atb/config.toml)
      --data-dir string   directory for the local metadata index (default ~/.local/share/atb/data; override with $ATB_DATA_DIR)

SEE ALSO

• atb - Query and download AllTheBacteria genomes
• atb osf download - Download files from OSF matching a pattern
• atb osf ls - List files and projects in the ATB index